Browse of TCMCG051C50304 protein

CDS

Accession Number	TCMCG051C50304
gbkey	CDS
Protein Id	XP_024448225.1
Location	complement(join(55462..56319,56421..56492,57666..57746,58973..59260))
Gene	LOC18106495
GeneID	18106495
Organism	Populus trichocarpa

Protein

Length	432aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA17973
db_source	XM_024592457.1
Definition	pre-mRNA splicing factor SR-like 1 isoform X1 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category	S
Description	Pre-mRNA-splicing factor
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko03041        [VIEW IN KEGG]
KEGG_ko	ko:K12850        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko03040        [VIEW IN KEGG] map03040        [VIEW IN KEGG]
GOs	GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005681        [VIEW IN EMBL-EBI] GO:0006950        [VIEW IN EMBL-EBI] GO:0006970        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0009628        [VIEW IN EMBL-EBI] GO:0009651        [VIEW IN EMBL-EBI] GO:0010035        [VIEW IN EMBL-EBI] GO:0010038        [VIEW IN EMBL-EBI] GO:0010226        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0042221        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0050896        [VIEW IN EMBL-EBI] GO:0071011        [VIEW IN EMBL-EBI] GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGAGATACAGACAAATGGGAAACCAATAGATTCGCTGTTAGAGAAGGTCCTTTGTATGAACATACTATCATCAGATTACTTCAAGGAGCTTTACCGATTAAAGACATACCATGAAGTGATAGATGAAATATACAATCAAGTTGACCATGTTGAGCCATGGATGACTGGCAACTGTCGTGGTCCATCTACTTCCTTTTGCCTTCTATACAAGTTCTTCACCATGAAACTCACTGTCAAACAAATGCATGGTTTGCTAAAGCACAAGGATTCTCCTTATATCAGAGCGGTTGGGTTCCTCTACCTGAGATATGCTGGGGATCCAAAGACACTGTGGAATTGGTTTGAACCATATATTAAAGACGATGAGGAATTTTCTCCAGGAACTAGTGGAAGGAAGACGACAATGGGTGTTTATGTGCGTGATTTGCTTCTCGGACAGTACTACTTTGATACCCTTTTCCCCCGTATTCCTGTTCCTGTCATGCGGCAGATCACATCGAATCTGGAGAAGTTGAAGCTACCAACAAAAATCTCTGGTTCGACAGGGGATGGAAACCGTCATGGATCTGATGATACGGCACGCCGGCCACCATCTGTGAAGGCAGCACTTTCAGTCTCTTTTGGTCAGCGTGCTCCTCATCGTGCATCAACCAGGGATTCGTCTCCTGTTCGTCGCACAATACCTTCCCCCTCCTATGACAGAACCAGTGATGATTCACGAAGTCGACTCGGCCAGAGTCGTGAATATTCTGATAAAGAATATTCAGATCGGGATCATGATAGGGGTAGGGAAAGGGACCAAGACCATGATCGGGATAGAGAGAGGGACAGGGTTCGGGATAGGGATCAGGAGAGAGAAAGGGACCGGGATCGTGAAAGGGATTGGGATCAGAGTCGGGACAGAGACAGGGATCGGGAAAGGGATAGATACAGAAGGTATGATTATGATAGAAGTTCCAGGTACACTGATAGGGAAAGCAGAAGGGATTCTGAACAGAGCAGCCGTGACAGAAGTAGGCATTATAGAGAAAGTAGTTCTTATAGAAGCCGCAGTCGAAGCAGGAGCAGGAGCAGGAGCCGAAGCTTGCAAGCTGGCGCATCACCATTTGATCGCCATCCAACTCCTCAAAGGGATGGAAACAAGGATAAGACATCTGCGCCTAGCAATCTGGCTAAGCTCAAAGATCTTTATGGTGATCTTAGTGATCAGAAAGGGGATGCTGGCCTGGAAAGGGTTCCTCGGAGGGATAATGATGGTGAAGAGGTTTTTAGACTCGGTGGTTCCACTTGGAGGTAG

Protein:   MEIQTNGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVIDEIYNQVDHVEPWMTGNCRGPSTSFCLLYKFFTMKLTVKQMHGLLKHKDSPYIRAVGFLYLRYAGDPKTLWNWFEPYIKDDEEFSPGTSGRKTTMGVYVRDLLLGQYYFDTLFPRIPVPVMRQITSNLEKLKLPTKISGSTGDGNRHGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRTIPSPSYDRTSDDSRSRLGQSREYSDKEYSDRDHDRGRERDQDHDRDRERDRVRDRDQERERDRDRERDWDQSRDRDRDRERDRYRRYDYDRSSRYTDRESRRDSEQSSRDRSRHYRESSSYRSRSRSRSRSRSRSLQAGASPFDRHPTPQRDGNKDKTSAPSNLAKLKDLYGDLSDQKGDAGLERVPRRDNDGEEVFRLGGSTWR